Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm19430-201ENSMUST00000193847 2137 ntBASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Gm45433-201ENSMUST00000209386 247 ntBASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 AC174797.2-202ENSMUST00000225729 568 ntBASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pabpn1Q8CCS6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pabpn1Q8CCS6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Pabpn1Q8CCS6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 App-207ENSMUST00000227737 2827 ntBASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Gm14460-201ENSMUST00000121511 639 ntBASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 AC169036.1-201ENSMUST00000227994 296 ntBASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC21.2■□□□□ 0.98
Pabpn1Q8CCS6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Gm5597-201ENSMUST00000182353 1193 ntBASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Gm38049-201ENSMUST00000195698 1372 ntBASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pabpn1Q8CCS6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Gm43423-201ENSMUST00000198390 2094 ntBASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 AC156501.1-201ENSMUST00000228219 270 ntBASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pabpn1Q8CCS6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Gm13045-201ENSMUST00000119019 712 ntBASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Gm15432-201ENSMUST00000121106 195 ntBASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC21.17■□□□□ 0.98
Pabpn1Q8CCS6 Gm24749-201ENSMUST00000157838 343 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms