Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm19220-201ENSMUST00000222682 803 ntBASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Alx1Q8C8B0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Alx1Q8C8B0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Gm45668-201ENSMUST00000211271 493 ntBASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alx1Q8C8B0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alx1Q8C8B0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.26■□□□□ 0.19
Alx1Q8C8B0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms