Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Mir3547-201ENSMUST00000175461 88 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm27572-201ENSMUST00000183702 255 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm42627-201ENSMUST00000197347 224 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a6Q8C6K9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.39
Col6a6Q8C6K9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a6Q8C6K9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a6Q8C6K9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a6Q8C6K9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a6Q8C6K9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gm12176-201ENSMUST00000121420 875 ntBASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a6Q8C6K9 Gm24420-201ENSMUST00000176676 59 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms