Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Gm15957-201ENSMUST00000118893 974 ntBASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Gm20553-201ENSMUST00000204205 844 ntBASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Gm45612-201ENSMUST00000211320 160 ntBASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim4Q8C1Q6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Gm15467-201ENSMUST00000120582 445 ntBASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Rprl2-201ENSMUST00000157150 290 ntBASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim4Q8C1Q6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim4Q8C1Q6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms