Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.47■□□□□ 0.55
Cps1Q8C196 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cps1Q8C196 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC18.47■□□□□ 0.55
Cps1Q8C196 Gm16570-201ENSMUST00000161951 436 ntBASIC18.47■□□□□ 0.55
Cps1Q8C196 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.47■□□□□ 0.55
Cps1Q8C196 AC173210.1-201ENSMUST00000222341 1131 ntBASIC18.47■□□□□ 0.55
Cps1Q8C196 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cps1Q8C196 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC18.47■□□□□ 0.55
Cps1Q8C196 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cps1Q8C196 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cps1Q8C196 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cps1Q8C196 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Cps1Q8C196 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cps1Q8C196 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Cps1Q8C196 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC18.46■□□□□ 0.55
Cps1Q8C196 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC18.46■□□□□ 0.55
Cps1Q8C196 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.46■□□□□ 0.55
Cps1Q8C196 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Gm6082-201ENSMUST00000215204 454 ntBASIC18.46■□□□□ 0.55
Cps1Q8C196 Gm32025-201ENSMUST00000217960 307 ntBASIC18.46■□□□□ 0.55
Cps1Q8C196 AC122371.3-201ENSMUST00000223402 1061 ntBASIC18.46■□□□□ 0.55
Cps1Q8C196 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.46■□□□□ 0.55
Cps1Q8C196 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cps1Q8C196 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.46■□□□□ 0.54
Cps1Q8C196 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm37042-201ENSMUST00000193816 581 ntBASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.45■□□□□ 0.54
Cps1Q8C196 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cps1Q8C196 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.44■□□□□ 0.54
Cps1Q8C196 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC18.44■□□□□ 0.54
Cps1Q8C196 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC18.44■□□□□ 0.54
Cps1Q8C196 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.44■□□□□ 0.54
Cps1Q8C196 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cps1Q8C196 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cps1Q8C196 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cps1Q8C196 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Cps1Q8C196 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cps1Q8C196 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cps1Q8C196 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms