Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh3rf2Q8BZT2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm43438-201ENSMUST00000198133 379 ntBASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm19078-201ENSMUST00000206311 727 ntBASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.15□□□□□ -0.14
Sh3rf2Q8BZT2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh3rf2Q8BZT2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms