Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp47Q8BY87 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Gm8463-201ENSMUST00000208573 613 ntBASIC19.65■□□□□ 0.74
Usp47Q8BY87 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.65■□□□□ 0.74
Usp47Q8BY87 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp47Q8BY87 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp47Q8BY87 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp47Q8BY87 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.74
Usp47Q8BY87 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.64■□□□□ 0.73
Usp47Q8BY87 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp47Q8BY87 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp47Q8BY87 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Gm28182-201ENSMUST00000188354 2477 ntBASIC19.62■□□□□ 0.73
Usp47Q8BY87 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp47Q8BY87 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms