Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VmacQ8BP01 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
VmacQ8BP01 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VmacQ8BP01 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VmacQ8BP01 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VmacQ8BP01 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
VmacQ8BP01 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.08■□□□□ 0.16
VmacQ8BP01 Gm24694-201ENSMUST00000180054 110 ntBASIC16.08■□□□□ 0.16
VmacQ8BP01 Gm27663-201ENSMUST00000184839 110 ntBASIC16.08■□□□□ 0.16
VmacQ8BP01 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.08■□□□□ 0.16
VmacQ8BP01 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.08■□□□□ 0.16
VmacQ8BP01 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
VmacQ8BP01 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VmacQ8BP01 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Gm21854-201ENSMUST00000179901 471 ntBASIC16.07■□□□□ 0.16
VmacQ8BP01 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.07■□□□□ 0.16
VmacQ8BP01 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VmacQ8BP01 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VmacQ8BP01 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VmacQ8BP01 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.06■□□□□ 0.16
VmacQ8BP01 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm29667-201ENSMUST00000190817 490 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.06■□□□□ 0.16
VmacQ8BP01 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.05■□□□□ 0.16
VmacQ8BP01 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.05■□□□□ 0.16
VmacQ8BP01 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Gm9522-201ENSMUST00000182394 926 ntBASIC16.05■□□□□ 0.16
VmacQ8BP01 Gm18905-201ENSMUST00000205454 928 ntBASIC16.05■□□□□ 0.16
VmacQ8BP01 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.05■□□□□ 0.16
VmacQ8BP01 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.05■□□□□ 0.16
VmacQ8BP01 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VmacQ8BP01 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms