Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 CT573034.1-201ENSMUST00000222983 313 ntBASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col16a1Q8BLX7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col16a1Q8BLX7 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.01■□□□□ 0.47
Col16a1Q8BLX7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm15370-201ENSMUST00000117158 253 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm12176-201ENSMUST00000121420 875 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm7809-201ENSMUST00000153199 742 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm27320-201ENSMUST00000184892 109 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 AC155637.1-201ENSMUST00000218560 636 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm45504-201ENSMUST00000211407 2107 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm3890-201ENSMUST00000182416 207 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm18753-201ENSMUST00000201000 566 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm6082-201ENSMUST00000215204 454 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Mir433-201ENSMUST00000093564 124 ntBASIC18■□□□□ 0.47
Col16a1Q8BLX7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col16a1Q8BLX7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms