Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Mzt1-203ENSMUST00000227948 952 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Mir8117-201ENSMUST00000184773 107 ntBASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.21□□□□□ -0.45
Cdhr3Q8BL00 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdhr3Q8BL00 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Gm18737-201ENSMUST00000173594 937 ntBASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Gm5364-201ENSMUST00000216789 889 ntBASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdhr3Q8BL00 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms