Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Mir8102-201ENSMUST00000184148 139 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm28630-201ENSMUST00000187806 498 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm6888-201ENSMUST00000221983 706 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Depdc1bQ8BH88 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm12151-201ENSMUST00000121374 290 ntBASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm27437-201ENSMUST00000183429 107 ntBASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm18766-201ENSMUST00000189811 808 ntBASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms