Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Efs-202ENSMUST00000227037 2540 ntBASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp6nlQ80XC3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Gm12485-201ENSMUST00000119641 291 ntBASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Gm10478-201ENSMUST00000084451 396 ntBASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp6nlQ80XC3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Gm13612-201ENSMUST00000119276 390 ntBASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Gm29649-201ENSMUST00000185649 419 ntBASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp6nlQ80XC3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Usp6nlQ80XC3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm44397-201ENSMUST00000195950 113 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp6nlQ80XC3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp6nlQ80XC3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms