Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Sh3d21Q7TSG5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Gm44608-201ENSMUST00000206827 855 ntBASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Gm16476-201ENSMUST00000221544 139 ntBASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sh3d21Q7TSG5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sh3d21Q7TSG5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sh3d21Q7TSG5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm25144-201ENSMUST00000179561 110 ntBASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm25352-201ENSMUST00000179815 110 ntBASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3d21Q7TSG5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms