Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.77□□□□□ -0.53
Rif1Q6PR54 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.77□□□□□ -0.53
Rif1Q6PR54 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 App-207ENSMUST00000227737 2827 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm24548-201ENSMUST00000158650 108 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Gm25517-201ENSMUST00000083865 134 ntBASIC11.76□□□□□ -0.53
Rif1Q6PR54 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rif1Q6PR54 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm25261-201ENSMUST00000157416 134 ntBASIC11.75□□□□□ -0.53
Rif1Q6PR54 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.75□□□□□ -0.53
Rif1Q6PR54 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.75□□□□□ -0.53
Rif1Q6PR54 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm23200-201ENSMUST00000104379 132 ntBASIC11.75□□□□□ -0.53
Rif1Q6PR54 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rif1Q6PR54 Gm10268-201ENSMUST00000085340 555 ntBASIC11.75□□□□□ -0.53
Rif1Q6PR54 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms