Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm5187-201ENSMUST00000117317 991 ntBASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nup98Q6PFD9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Gm5370-201ENSMUST00000187187 574 ntBASIC16.21■□□□□ 0.19
Nup98Q6PFD9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.21■□□□□ 0.19
Nup98Q6PFD9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nup98Q6PFD9 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm14723-201ENSMUST00000118686 215 ntBASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.2■□□□□ 0.18
Nup98Q6PFD9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nup98Q6PFD9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm16372-201ENSMUST00000073088 450 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm16202-201ENSMUST00000117532 544 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm13369-201ENSMUST00000119442 987 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Gm27572-201ENSMUST00000183702 255 ntBASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nup98Q6PFD9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms