Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.34■□□□□ 0.21
Smarcc2Q6PDG5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc2Q6PDG5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc2Q6PDG5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Smarcc2Q6PDG5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc2Q6PDG5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gm27306-201ENSMUST00000183970 107 ntBASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gm27989-201ENSMUST00000184721 107 ntBASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc2Q6PDG5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Gm16476-201ENSMUST00000221544 139 ntBASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Mir125a-201ENSMUST00000083545 68 ntBASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc2Q6PDG5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc2Q6PDG5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc2Q6PDG5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms