Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Mir8117-201ENSMUST00000184773 107 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smarcd3Q6P9Z1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd3Q6P9Z1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm12882-201ENSMUST00000121696 517 ntBASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm5364-201ENSMUST00000216789 889 ntBASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smarcd3Q6P9Z1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcd3Q6P9Z1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms