Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Gm10253-201ENSMUST00000194270 940 ntBASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Gm7774-201ENSMUST00000200064 533 ntBASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sp140Q6NSQ5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sp140Q6NSQ5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm23935-201ENSMUST00000102303 57 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm24270-201ENSMUST00000102326 57 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Mir449b-201ENSMUST00000104833 80 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm6415-201ENSMUST00000118488 348 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm24245-201ENSMUST00000157318 57 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm16476-201ENSMUST00000221544 139 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sp140Q6NSQ5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sp140Q6NSQ5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms