Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AtmQ62388 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.96□□□□□ -0.34
AtmQ62388 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.95□□□□□ -0.34
AtmQ62388 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.95□□□□□ -0.34
AtmQ62388 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.95□□□□□ -0.34
AtmQ62388 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.95□□□□□ -0.34
AtmQ62388 Gm11591-201ENSMUST00000120063 702 ntBASIC12.95□□□□□ -0.34
AtmQ62388 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Gm16379-201ENSMUST00000161469 348 ntBASIC12.95□□□□□ -0.34
AtmQ62388 Gm8762-201ENSMUST00000193486 339 ntBASIC12.95□□□□□ -0.34
AtmQ62388 Gm18893-201ENSMUST00000198416 943 ntBASIC12.95□□□□□ -0.34
AtmQ62388 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
AtmQ62388 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AtmQ62388 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
AtmQ62388 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AtmQ62388 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.95□□□□□ -0.34
AtmQ62388 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gm11222-201ENSMUST00000119005 738 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AtmQ62388 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AtmQ62388 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Gm4607-201ENSMUST00000206649 577 ntBASIC12.94□□□□□ -0.34
AtmQ62388 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.94□□□□□ -0.34
AtmQ62388 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
AtmQ62388 Gm45770-201ENSMUST00000212105 616 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.94□□□□□ -0.34
AtmQ62388 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AtmQ62388 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AtmQ62388 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms