Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Gm29741-201ENSMUST00000192667 421 ntBASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gm28911-201ENSMUST00000188837 117 ntBASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gm19078-201ENSMUST00000206311 727 ntBASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gm18307-201ENSMUST00000206864 949 ntBASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rc3h1Q4VGL6 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Gm24420-201ENSMUST00000176676 59 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Gm27701-201ENSMUST00000184498 110 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rc3h1Q4VGL6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms