Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm11524-201ENSMUST00000119349 807 ntBASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm15376-201ENSMUST00000122258 783 ntBASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm27572-201ENSMUST00000183702 255 ntBASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ddx49Q4FZF3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx49Q4FZF3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm29649-201ENSMUST00000185649 419 ntBASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm37714-201ENSMUST00000194742 342 ntBASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.26■□□□□ 0.19
Ddx49Q4FZF3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.25■□□□□ 0.19
Ddx49Q4FZF3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx49Q4FZF3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms