Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Gm15920-201ENSMUST00000118998 402 ntBASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Gm44872-201ENSMUST00000207864 420 ntBASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Syne3Q4FZC9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Mir6956-201ENSMUST00000183598 62 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Syne3Q4FZC9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.86□□□□□ -0.03
Syne3Q4FZC9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Syne3Q4FZC9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Syne3Q4FZC9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne3Q4FZC9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne3Q4FZC9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Syne3Q4FZC9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms