Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Gm10268-201ENSMUST00000085340 555 ntBASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Arhgef40Q3UPH7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Gm14608-201ENSMUST00000120030 1553 ntBASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Gm38197-201ENSMUST00000192320 2122 ntBASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC20.22■□□□□ 0.83
Arhgef40Q3UPH7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Gm44364-201ENSMUST00000198368 141 ntBASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 n-R5s195-201ENSMUST00000082891 119 ntBASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Arhgef40Q3UPH7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Arhgef40Q3UPH7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 AC154462.2-201ENSMUST00000227519 370 ntBASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Arhgef40Q3UPH7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms