Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Spg7Q3ULF4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Spg7Q3ULF4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Gm27486-201ENSMUST00000184923 80 ntBASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.6■□□□□ 0.25
Spg7Q3ULF4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.6■□□□□ 0.25
Spg7Q3ULF4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.59■□□□□ 0.25
Spg7Q3ULF4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Gm7287-201ENSMUST00000205267 602 ntBASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Gm6983-201ENSMUST00000214912 628 ntBASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg7Q3ULF4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg7Q3ULF4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm13689-201ENSMUST00000119360 685 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm27839-201ENSMUST00000184242 106 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Mir7085-201ENSMUST00000184353 66 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm38223-201ENSMUST00000194484 695 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.58■□□□□ 0.24
Spg7Q3ULF4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg7Q3ULF4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms