Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gm17889-201ENSMUST00000198410 598 ntBASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.75□□□□□ -0.37
Spg11Q3UHA3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Gm24447-201ENSMUST00000083977 338 ntBASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Spg11Q3UHA3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm14350-201ENSMUST00000116642 640 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Spg11Q3UHA3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms