Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf149Q3U2C5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Rnf149Q3U2C5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rnf149Q3U2C5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf149Q3U2C5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf149Q3U2C5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm24513-201ENSMUST00000174964 138 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm10154-201ENSMUST00000084445 354 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf149Q3U2C5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gm6736-201ENSMUST00000166583 948 ntBASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gm2451-201ENSMUST00000199447 999 ntBASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gm10290-201ENSMUST00000200451 999 ntBASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf149Q3U2C5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms