Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cul4aQ3TCH7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Grk6-205ENSMUST00000224653 2976 ntBASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cul4aQ3TCH7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm18206-201ENSMUST00000207027 926 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm18049-201ENSMUST00000208909 581 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cul4aQ3TCH7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Gm18889-201ENSMUST00000174284 929 ntBASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Mir125a-201ENSMUST00000083545 68 ntBASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cul4aQ3TCH7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms