Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim63Q38HM4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim63Q38HM4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.49□□□□□ -0.57
Trim63Q38HM4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.49□□□□□ -0.57
Trim63Q38HM4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim63Q38HM4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.48□□□□□ -0.57
Trim63Q38HM4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Gm10849-201ENSMUST00000100397 618 ntBASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms