Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Gm13223-201ENSMUST00000118609 747 ntBASIC12.3□□□□□ -0.44
Thbs3Q05895 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Gm27321-201ENSMUST00000185021 205 ntBASIC12.3□□□□□ -0.44
Thbs3Q05895 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.3□□□□□ -0.44
Thbs3Q05895 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.3□□□□□ -0.44
Thbs3Q05895 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Gm15393-201ENSMUST00000120499 219 ntBASIC12.29□□□□□ -0.44
Thbs3Q05895 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.29□□□□□ -0.44
Thbs3Q05895 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Gm29741-201ENSMUST00000192667 421 ntBASIC12.29□□□□□ -0.44
Thbs3Q05895 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Thbs3Q05895 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Thbs3Q05895 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.28□□□□□ -0.44
Thbs3Q05895 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.28□□□□□ -0.44
Thbs3Q05895 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Thbs3Q05895 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.28□□□□□ -0.44
Thbs3Q05895 Gm21470-201ENSMUST00000187680 696 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms