Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22065-201ENSMUST00000103753 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22066-201ENSMUST00000103761 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24932-201ENSMUST00000103763 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24115-201ENSMUST00000103799 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22190-201ENSMUST00000103827 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22191-201ENSMUST00000103831 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24721-201ENSMUST00000103849 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm28018-201ENSMUST00000103869 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm26399-201ENSMUST00000103937 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm4995-201ENSMUST00000117247 432 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25349-201ENSMUST00000177728 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm23616-201ENSMUST00000177797 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25871-201ENSMUST00000177816 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24752-201ENSMUST00000178240 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24496-201ENSMUST00000178287 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25649-201ENSMUST00000178476 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25548-201ENSMUST00000178681 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm23147-201ENSMUST00000178841 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm26095-201ENSMUST00000179270 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22171-201ENSMUST00000179283 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm23936-201ENSMUST00000179354 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm22619-201ENSMUST00000179516 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25255-201ENSMUST00000179579 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24755-201ENSMUST00000179691 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm26506-201ENSMUST00000179692 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm25086-201ENSMUST00000179931 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm23243-201ENSMUST00000180047 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24659-201ENSMUST00000180212 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm24169-201ENSMUST00000180244 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm23689-201ENSMUST00000180354 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm27359-201ENSMUST00000184153 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm27785-201ENSMUST00000184268 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm27466-201ENSMUST00000184396 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm27703-201ENSMUST00000184836 110 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm43474-201ENSMUST00000196415 774 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.07□□□□□ -0.16
Pfdn6Q03958 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn6Q03958 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Gm13823-201ENSMUST00000119930 345 ntBASIC14.06□□□□□ -0.16
Pfdn6Q03958 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.06□□□□□ -0.16
Pfdn6Q03958 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms