Protein–RNA interactions for Protein: P97460

Npas2, Neuronal PAS domain-containing protein 2, mousemouse

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas2P97460 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Npas2P97460 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Npas2P97460 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.38□□□□□ -0.11
Npas2P97460 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.38□□□□□ -0.11
Npas2P97460 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Npas2P97460 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npas2P97460 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.37□□□□□ -0.11
Npas2P97460 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.37□□□□□ -0.11
Npas2P97460 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Npas2P97460 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Gm2445-201ENSMUST00000182798 989 ntBASIC14.37□□□□□ -0.11
Npas2P97460 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.37□□□□□ -0.11
Npas2P97460 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Npas2P97460 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Npas2P97460 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npas2P97460 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npas2P97460 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.36□□□□□ -0.11
Npas2P97460 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Npas2P97460 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.36□□□□□ -0.11
Npas2P97460 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Mir6990-201ENSMUST00000183724 91 ntBASIC14.36□□□□□ -0.11
Npas2P97460 Gm27631-201ENSMUST00000184163 466 ntBASIC14.36□□□□□ -0.11
Npas2P97460 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.36□□□□□ -0.11
Npas2P97460 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Npas2P97460 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.36□□□□□ -0.11
Npas2P97460 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npas2P97460 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Npas2P97460 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Npas2P97460 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npas2P97460 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms