Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npas1P97459 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Npas1P97459 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.76□□□□□ -0.53
Npas1P97459 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Npas1P97459 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gm25990-201ENSMUST00000102440 86 ntBASIC11.76□□□□□ -0.53
Npas1P97459 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.76□□□□□ -0.53
Npas1P97459 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.76□□□□□ -0.53
Npas1P97459 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.76□□□□□ -0.53
Npas1P97459 Gm18246-201ENSMUST00000221023 728 ntBASIC11.76□□□□□ -0.53
Npas1P97459 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.76□□□□□ -0.53
Npas1P97459 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Npas1P97459 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.76□□□□□ -0.53
Npas1P97459 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.76□□□□□ -0.53
Npas1P97459 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npas1P97459 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.75□□□□□ -0.53
Npas1P97459 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Npas1P97459 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.75□□□□□ -0.53
Npas1P97459 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Npas1P97459 Gm9726-201ENSMUST00000180321 678 ntBASIC11.75□□□□□ -0.53
Npas1P97459 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.75□□□□□ -0.53
Npas1P97459 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.75□□□□□ -0.53
Npas1P97459 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Npas1P97459 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Npas1P97459 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Npas1P97459 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.74□□□□□ -0.53
Npas1P97459 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.74□□□□□ -0.53
Npas1P97459 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Npas1P97459 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Npas1P97459 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Npas1P97459 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Npas1P97459 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms