Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.75□□□□□ -0.53
SgcaP82350 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
SgcaP82350 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcaP82350 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SgcaP82350 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.74□□□□□ -0.53
SgcaP82350 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.74□□□□□ -0.53
SgcaP82350 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gm27357-201ENSMUST00000183754 135 ntBASIC11.74□□□□□ -0.53
SgcaP82350 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.74□□□□□ -0.53
SgcaP82350 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.74□□□□□ -0.53
SgcaP82350 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
SgcaP82350 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.74□□□□□ -0.53
SgcaP82350 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SgcaP82350 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
SgcaP82350 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcaP82350 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SgcaP82350 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcaP82350 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SgcaP82350 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Olfr286-202ENSMUST00000205305 969 ntBASIC11.73□□□□□ -0.53
SgcaP82350 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcaP82350 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.73□□□□□ -0.53
SgcaP82350 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SgcaP82350 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SgcaP82350 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcaP82350 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SgcaP82350 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcaP82350 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.72□□□□□ -0.53
SgcaP82350 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms