Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SgcbP82349 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SgcbP82349 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcbP82349 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
SgcbP82349 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SgcbP82349 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Gm12585-201ENSMUST00000117307 290 ntBASIC12.48□□□□□ -0.41
SgcbP82349 Gm4875-201ENSMUST00000118257 786 ntBASIC12.48□□□□□ -0.41
SgcbP82349 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgcbP82349 Gm43703-201ENSMUST00000200523 763 ntBASIC12.48□□□□□ -0.41
SgcbP82349 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.48□□□□□ -0.41
SgcbP82349 Gm18027-201ENSMUST00000218947 619 ntBASIC12.48□□□□□ -0.41
SgcbP82349 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
SgcbP82349 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.48□□□□□ -0.41
SgcbP82349 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcbP82349 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcbP82349 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.47□□□□□ -0.41
SgcbP82349 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.47□□□□□ -0.41
SgcbP82349 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms