Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.13■□□□□ 0.01
CiitaP79621 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CiitaP79621 Mir698-201ENSMUST00000102164 109 ntBASIC15.13■□□□□ 0.01
CiitaP79621 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.13■□□□□ 0.01
CiitaP79621 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.13■□□□□ 0.01
CiitaP79621 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CiitaP79621 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CiitaP79621 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm43094-201ENSMUST00000196549 921 ntBASIC15.13■□□□□ 0.01
CiitaP79621 Gm19078-201ENSMUST00000206311 727 ntBASIC15.13■□□□□ 0.01
CiitaP79621 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.13■□□□□ 0.01
CiitaP79621 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CiitaP79621 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.13■□□□□ 0.01
CiitaP79621 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.12■□□□□ 0.01
CiitaP79621 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CiitaP79621 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CiitaP79621 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CiitaP79621 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CiitaP79621 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.12■□□□□ 0.01
CiitaP79621 Gm45384-201ENSMUST00000210451 277 ntBASIC15.12■□□□□ 0.01
CiitaP79621 Gm5186-201ENSMUST00000218781 920 ntBASIC15.12■□□□□ 0.01
CiitaP79621 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.12■□□□□ 0.01
CiitaP79621 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.12■□□□□ 0.01
CiitaP79621 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.12■□□□□ 0.01
CiitaP79621 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CiitaP79621 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CiitaP79621 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CiitaP79621 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CiitaP79621 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CiitaP79621 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
CiitaP79621 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.11■□□□□ 0.01
CiitaP79621 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.11■□□□□ 0.01
CiitaP79621 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.11■□□□□ 0.01
CiitaP79621 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.11■□□□□ 0.01
CiitaP79621 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.11■□□□□ 0.01
CiitaP79621 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.11■□□□□ 0.01
CiitaP79621 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CiitaP79621 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms