Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Cxcr4P70658 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.16□□□□□ -0.3
Cxcr4P70658 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cxcr4P70658 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.15□□□□□ -0.3
Cxcr4P70658 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcr4P70658 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcr4P70658 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cxcr4P70658 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcr4P70658 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.15□□□□□ -0.3
Cxcr4P70658 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.15□□□□□ -0.3
Cxcr4P70658 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcr4P70658 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcr4P70658 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcr4P70658 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcr4P70658 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcr4P70658 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Gm10275-202ENSMUST00000168697 495 ntBASIC13.14□□□□□ -0.31
Cxcr4P70658 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.14□□□□□ -0.31
Cxcr4P70658 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Gm10275-201ENSMUST00000092620 635 ntBASIC13.14□□□□□ -0.31
Cxcr4P70658 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.14□□□□□ -0.31
Cxcr4P70658 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.14□□□□□ -0.31
Cxcr4P70658 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcr4P70658 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cxcr4P70658 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.13□□□□□ -0.31
Cxcr4P70658 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.13□□□□□ -0.31
Cxcr4P70658 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcr4P70658 Gm22175-201ENSMUST00000175007 78 ntBASIC13.13□□□□□ -0.31
Cxcr4P70658 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.13□□□□□ -0.31
Cxcr4P70658 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms