Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Usp9xP70398 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp9xP70398 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm24990-201ENSMUST00000157406 323 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm38223-201ENSMUST00000194484 695 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp9xP70398 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp9xP70398 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Usp9xP70398 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm15370-201ENSMUST00000117158 253 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Gm14017-201ENSMUST00000121934 386 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Gm6222-202ENSMUST00000182143 629 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Gm2260-201ENSMUST00000184965 657 ntBASIC11.51□□□□□ -0.57
Usp9xP70398 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.51□□□□□ -0.57
Usp9xP70398 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Usp9xP70398 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.51□□□□□ -0.57
Usp9xP70398 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Usp9xP70398 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.5□□□□□ -0.57
Usp9xP70398 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Usp9xP70398 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gm8805-201ENSMUST00000117848 313 ntBASIC11.5□□□□□ -0.57
Usp9xP70398 Gm25261-201ENSMUST00000157416 134 ntBASIC11.5□□□□□ -0.57
Usp9xP70398 Gm25668-201ENSMUST00000157700 129 ntBASIC11.5□□□□□ -0.57
Usp9xP70398 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.5□□□□□ -0.57
Usp9xP70398 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Usp9xP70398 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Usp9xP70398 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.5□□□□□ -0.57
Usp9xP70398 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.5□□□□□ -0.57
Usp9xP70398 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gm42900-201ENSMUST00000197184 2167 ntBASIC11.5□□□□□ -0.57
Usp9xP70398 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.5□□□□□ -0.57
Usp9xP70398 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Usp9xP70398 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Usp9xP70398 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.49□□□□□ -0.57
Usp9xP70398 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Usp9xP70398 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Usp9xP70398 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms