Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm3P62311 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Lsm3P62311 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.75□□□□□ -0.37
Lsm3P62311 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Lsm3P62311 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.74□□□□□ -0.37
Lsm3P62311 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.74□□□□□ -0.37
Lsm3P62311 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm3P62311 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Lsm3P62311 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm3P62311 Olfr129-201ENSMUST00000122318 993 ntBASIC12.74□□□□□ -0.37
Lsm3P62311 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lsm3P62311 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm3P62311 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lsm3P62311 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm3P62311 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lsm3P62311 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lsm3P62311 Gm13836-201ENSMUST00000121159 501 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Gm2451-201ENSMUST00000199447 999 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Gm10290-201ENSMUST00000200451 999 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Olfr286-202ENSMUST00000205305 969 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.73□□□□□ -0.37
Lsm3P62311 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lsm3P62311 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm3P62311 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.73□□□□□ -0.37
Lsm3P62311 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lsm3P62311 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.72□□□□□ -0.37
Lsm3P62311 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.72□□□□□ -0.37
Lsm3P62311 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.72□□□□□ -0.37
Lsm3P62311 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm3P62311 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.72□□□□□ -0.37
Lsm3P62311 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms