Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sec61a1P61620 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm44335-201ENSMUST00000196879 141 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm44297-201ENSMUST00000198304 141 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm44346-201ENSMUST00000198851 141 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sec61a1P61620 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61a1P61620 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.34□□□□□ -0.43
Sec61a1P61620 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.34□□□□□ -0.43
Sec61a1P61620 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.34□□□□□ -0.43
Sec61a1P61620 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
Sec61a1P61620 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.34□□□□□ -0.43
Sec61a1P61620 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a1P61620 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sec61a1P61620 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a1P61620 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a1P61620 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a1P61620 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a1P61620 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.33□□□□□ -0.44
Sec61a1P61620 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a1P61620 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms