Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm15467-201ENSMUST00000120582 445 ntBASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm12882-201ENSMUST00000121696 517 ntBASIC12.42□□□□□ -0.42
Sf3b6P59708 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm9727-201ENSMUST00000161387 555 ntBASIC12.42□□□□□ -0.42
Sf3b6P59708 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.42□□□□□ -0.42
Sf3b6P59708 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.42□□□□□ -0.42
Sf3b6P59708 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sf3b6P59708 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.41□□□□□ -0.42
Sf3b6P59708 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.41□□□□□ -0.42
Sf3b6P59708 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm2445-201ENSMUST00000182798 989 ntBASIC12.41□□□□□ -0.42
Sf3b6P59708 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.41□□□□□ -0.42
Sf3b6P59708 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sf3b6P59708 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.41□□□□□ -0.42
Sf3b6P59708 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sf3b6P59708 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sf3b6P59708 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms