Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.31□□□□□ -0.12
Tubgcp3P58854 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm9719-201ENSMUST00000162765 543 ntBASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm37935-201ENSMUST00000192012 982 ntBASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.31□□□□□ -0.12
Tubgcp3P58854 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubgcp3P58854 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gm10253-201ENSMUST00000194270 940 ntBASIC14.3□□□□□ -0.12
Tubgcp3P58854 Gm5779-201ENSMUST00000218467 910 ntBASIC14.3□□□□□ -0.12
Tubgcp3P58854 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Mir125a-201ENSMUST00000083545 68 ntBASIC14.3□□□□□ -0.12
Tubgcp3P58854 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tubgcp3P58854 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm43575-201ENSMUST00000196420 516 ntBASIC14.29□□□□□ -0.12
Tubgcp3P58854 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm7774-201ENSMUST00000200064 533 ntBASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gm5312-201ENSMUST00000203728 547 ntBASIC14.29□□□□□ -0.12
Tubgcp3P58854 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.29□□□□□ -0.12
Tubgcp3P58854 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp3P58854 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms