Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Abcd3P55096 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.54□□□□□ -0.4
Abcd3P55096 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.54□□□□□ -0.4
Abcd3P55096 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Abcd3P55096 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.54□□□□□ -0.4
Abcd3P55096 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Abcd3P55096 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.54□□□□□ -0.4
Abcd3P55096 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm24543-201ENSMUST00000103867 82 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm15693-201ENSMUST00000120470 637 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm26308-201ENSMUST00000157768 69 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Gm28630-201ENSMUST00000187806 498 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Gm37714-201ENSMUST00000194742 342 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 Gm8396-201ENSMUST00000057361 823 ntBASIC12.53□□□□□ -0.4
Abcd3P55096 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.53□□□□□ -0.4
Abcd3P55096 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Abcd3P55096 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.53□□□□□ -0.4
Abcd3P55096 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Abcd3P55096 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Abcd3P55096 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Abcd3P55096 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abcd3P55096 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Abcd3P55096 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.52□□□□□ -0.4
Abcd3P55096 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Abcd3P55096 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Abcd3P55096 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Abcd3P55096 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Abcd3P55096 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Abcd3P55096 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Gm12428-201ENSMUST00000119844 727 ntBASIC12.52□□□□□ -0.41
Abcd3P55096 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Abcd3P55096 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.52□□□□□ -0.41
Abcd3P55096 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.52□□□□□ -0.41
Abcd3P55096 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.52□□□□□ -0.41
Abcd3P55096 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.52□□□□□ -0.41
Abcd3P55096 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Abcd3P55096 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Abcd3P55096 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Abcd3P55096 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.51□□□□□ -0.41
Abcd3P55096 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms