Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Gm8584-201ENSMUST00000171982 758 ntBASIC15.07■□□□□ 0
Nub1P54729 Gm27321-201ENSMUST00000185021 205 ntBASIC15.07■□□□□ 0
Nub1P54729 Gm9063-201ENSMUST00000223299 582 ntBASIC15.07■□□□□ 0
Nub1P54729 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nub1P54729 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Nub1P54729 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.07■□□□□ 0
Nub1P54729 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nub1P54729 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.06■□□□□ 0
Nub1P54729 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.06■□□□□ 0
Nub1P54729 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nub1P54729 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nub1P54729 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nub1P54729 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.06■□□□□ 0
Nub1P54729 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.06■□□□□ 0
Nub1P54729 Gm27306-201ENSMUST00000183970 107 ntBASIC15.06■□□□□ 0
Nub1P54729 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.06■□□□□ 0
Nub1P54729 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.06■□□□□ 0
Nub1P54729 Gm43703-201ENSMUST00000200523 763 ntBASIC15.06■□□□□ 0
Nub1P54729 Gm7775-201ENSMUST00000218871 853 ntBASIC15.06■□□□□ 0
Nub1P54729 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.06■□□□□ 0
Nub1P54729 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.06■□□□□ 0
Nub1P54729 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.06■□□□□ 0
Nub1P54729 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.06■□□□□ 0
Nub1P54729 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nub1P54729 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nub1P54729 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nub1P54729 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nub1P54729 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nub1P54729 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nub1P54729 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nub1P54729 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nub1P54729 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.05■□□□□ -0
Nub1P54729 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.05■□□□□ -0
Nub1P54729 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nub1P54729 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nub1P54729 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nub1P54729 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nub1P54729 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Nub1P54729 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.04■□□□□ -0
Nub1P54729 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms