Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox3P53784 Gm18624-201ENSMUST00000220966 658 ntBASIC13.43□□□□□ -0.26
Sox3P53784 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox3P53784 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.43□□□□□ -0.26
Sox3P53784 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
Sox3P53784 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox3P53784 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sox3P53784 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox3P53784 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox3P53784 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sox3P53784 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.42□□□□□ -0.26
Sox3P53784 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox3P53784 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox3P53784 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Gm45841-201ENSMUST00000207700 164 ntBASIC13.42□□□□□ -0.26
Sox3P53784 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 Matn2-206ENSMUST00000228570 2798 ntBASIC13.42□□□□□ -0.26
Sox3P53784 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox3P53784 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.42□□□□□ -0.26
Sox3P53784 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox3P53784 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox3P53784 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox3P53784 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox3P53784 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox3P53784 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox3P53784 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox3P53784 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox3P53784 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox3P53784 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.4□□□□□ -0.26
Sox3P53784 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Sox3P53784 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox3P53784 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox3P53784 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox3P53784 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.4□□□□□ -0.26
Sox3P53784 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox3P53784 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Sox3P53784 Mir1982-201ENSMUST00000157368 74 ntBASIC13.4□□□□□ -0.26
Sox3P53784 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms