Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpbP50405 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SftpbP50405 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.32□□□□□ -0.12
SftpbP50405 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SftpbP50405 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Gm12882-201ENSMUST00000121696 517 ntBASIC14.32□□□□□ -0.12
SftpbP50405 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.32□□□□□ -0.12
SftpbP50405 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 Gm18206-201ENSMUST00000207027 926 ntBASIC14.32□□□□□ -0.12
SftpbP50405 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.32□□□□□ -0.12
SftpbP50405 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.32□□□□□ -0.12
SftpbP50405 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SftpbP50405 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpbP50405 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.31□□□□□ -0.12
SftpbP50405 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.31□□□□□ -0.12
SftpbP50405 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.31□□□□□ -0.12
SftpbP50405 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.31□□□□□ -0.12
SftpbP50405 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.31□□□□□ -0.12
SftpbP50405 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.31□□□□□ -0.12
SftpbP50405 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SftpbP50405 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.31□□□□□ -0.12
SftpbP50405 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SftpbP50405 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.3□□□□□ -0.12
SftpbP50405 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.3□□□□□ -0.12
SftpbP50405 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.3□□□□□ -0.12
SftpbP50405 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SftpbP50405 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SftpbP50405 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms