Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf4P43488 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.51□□□□□ -0.25
Tnfsf4P43488 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.51□□□□□ -0.25
Tnfsf4P43488 Gm45612-201ENSMUST00000211320 160 ntBASIC13.51□□□□□ -0.25
Tnfsf4P43488 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf4P43488 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Gm38225-201ENSMUST00000194001 393 ntBASIC13.5□□□□□ -0.25
Tnfsf4P43488 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.5□□□□□ -0.25
Tnfsf4P43488 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
Tnfsf4P43488 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Gm27741-201ENSMUST00000185060 237 ntBASIC13.49□□□□□ -0.25
Tnfsf4P43488 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.49□□□□□ -0.25
Tnfsf4P43488 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.49□□□□□ -0.25
Tnfsf4P43488 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.49□□□□□ -0.25
Tnfsf4P43488 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfsf4P43488 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms