Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.71■□□□□ 0.11
Sdc2P43407 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sdc2P43407 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sdc2P43407 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sdc2P43407 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Sdc2P43407 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Gm13823-201ENSMUST00000119930 345 ntBASIC15.7■□□□□ 0.1
Sdc2P43407 Gm27494-201ENSMUST00000184735 189 ntBASIC15.7■□□□□ 0.1
Sdc2P43407 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.7■□□□□ 0.1
Sdc2P43407 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.7■□□□□ 0.1
Sdc2P43407 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sdc2P43407 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sdc2P43407 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Gm6222-201ENSMUST00000120787 396 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Gm13365-201ENSMUST00000121188 973 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.69■□□□□ 0.1
Sdc2P43407 Gm18889-201ENSMUST00000174284 929 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.69■□□□□ 0.1
Sdc2P43407 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sdc2P43407 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sdc2P43407 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sdc2P43407 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 BC001981-202ENSMUST00000191393 1545 ntBASIC15.68■□□□□ 0.1
Sdc2P43407 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sdc2P43407 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.68■□□□□ 0.1
Sdc2P43407 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.68■□□□□ 0.1
Sdc2P43407 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.68■□□□□ 0.1
Sdc2P43407 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sdc2P43407 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sdc2P43407 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sdc2P43407 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sdc2P43407 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms