Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Sox6P40645 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Gm13464-201ENSMUST00000119418 935 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.16□□□□□ -0.3
Sox6P40645 Rprl2-201ENSMUST00000157150 290 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.16□□□□□ -0.3
Sox6P40645 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.16□□□□□ -0.3
Sox6P40645 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox6P40645 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox6P40645 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox6P40645 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox6P40645 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.15□□□□□ -0.3
Sox6P40645 Gm27702-201ENSMUST00000184512 56 ntBASIC13.15□□□□□ -0.3
Sox6P40645 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox6P40645 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox6P40645 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox6P40645 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Sox6P40645 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox6P40645 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sox6P40645 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox6P40645 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox6P40645 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
Sox6P40645 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Gm18737-201ENSMUST00000173594 937 ntBASIC13.14□□□□□ -0.31
Sox6P40645 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Sox6P40645 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox6P40645 Gm9726-201ENSMUST00000180321 678 ntBASIC13.14□□□□□ -0.31
Sox6P40645 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.14□□□□□ -0.31
Sox6P40645 Gm20553-201ENSMUST00000204205 844 ntBASIC13.14□□□□□ -0.31
Sox6P40645 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox6P40645 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sox6P40645 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.14□□□□□ -0.31
Sox6P40645 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms