Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Cd9P40240 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cd9P40240 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.79□□□□□ -0.2
Cd9P40240 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cd9P40240 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cd9P40240 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.78□□□□□ -0.2
Cd9P40240 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.78□□□□□ -0.2
Cd9P40240 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cd9P40240 Gm38294-201ENSMUST00000192831 381 ntBASIC13.78□□□□□ -0.2
Cd9P40240 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.78□□□□□ -0.2
Cd9P40240 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cd9P40240 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.78□□□□□ -0.2
Cd9P40240 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cd9P40240 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.78□□□□□ -0.2
Cd9P40240 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cd9P40240 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cd9P40240 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cd9P40240 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cd9P40240 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.77□□□□□ -0.2
Cd9P40240 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.77□□□□□ -0.21
Cd9P40240 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.77□□□□□ -0.21
Cd9P40240 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.77□□□□□ -0.21
Cd9P40240 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.77□□□□□ -0.21
Cd9P40240 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.77□□□□□ -0.21
Cd9P40240 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.77□□□□□ -0.21
Cd9P40240 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cd9P40240 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.77□□□□□ -0.21
Cd9P40240 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.76□□□□□ -0.21
Cd9P40240 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.76□□□□□ -0.21
Cd9P40240 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Cd9P40240 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cd9P40240 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cd9P40240 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.76□□□□□ -0.21
Cd9P40240 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cd9P40240 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cd9P40240 Gm15240-201ENSMUST00000118156 720 ntBASIC13.76□□□□□ -0.21
Cd9P40240 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.76□□□□□ -0.21
Cd9P40240 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.76□□□□□ -0.21
Cd9P40240 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.76□□□□□ -0.21
Cd9P40240 Gm25925-201ENSMUST00000158314 306 ntBASIC13.76□□□□□ -0.21
Cd9P40240 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms