Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox5P35710 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.28■□□□□ 0.04
Sox5P35710 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.28■□□□□ 0.04
Sox5P35710 Gm18057-201ENSMUST00000208220 503 ntBASIC15.28■□□□□ 0.04
Sox5P35710 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox5P35710 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sox5P35710 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox5P35710 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox5P35710 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sox5P35710 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sox5P35710 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox5P35710 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.27■□□□□ 0.04
Sox5P35710 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Gm45612-201ENSMUST00000211320 160 ntBASIC15.27■□□□□ 0.04
Sox5P35710 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox5P35710 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.27■□□□□ 0.04
Sox5P35710 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox5P35710 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sox5P35710 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Sox5P35710 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Sox5P35710 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox5P35710 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox5P35710 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox5P35710 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox5P35710 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.26■□□□□ 0.03
Sox5P35710 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Sox5P35710 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox5P35710 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sox5P35710 Gm12260-201ENSMUST00000122447 411 ntBASIC15.26■□□□□ 0.03
Sox5P35710 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.26■□□□□ 0.03
Sox5P35710 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox5P35710 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox5P35710 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.25■□□□□ 0.03
Sox5P35710 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox5P35710 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox5P35710 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox5P35710 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms